Recent publications
This page lists the most recent peer-reviewed papers, presentations, and other publications authored and co-authored by members of the Scientific Solutions group.
Peer-reviewed papers Other Papers Tutorials & Education Events Presentations Posters
Peer-reviewed Journal and Conference Papers
Jinha Jung, Songlin Fei, Mitch Tuinstra, Yang Yang, Diane Wang, Carol Song, Jeffrey Gillan, Mahendra Bhandari, Amir Ibrahim, Lan Zhao, Tyson Swetnam, Bryan Barker, Minyoung Jung, Ben Hancock, "Data to science: an open-source online platform for managing, visualizing, and publishing UAS data," Proc. SPIE 13053, Autonomous Air and Ground Sensing Systems for Agricultural Optimization and Phenotyping IX, 1305303 (7 June 2024); https://doi.org/10.1117/12.3021199
Yiqing Qu, Chris Thompson, Rajesh Kalyanam. Designing and Deploying a FAIR Resource Portal for Geospatial Data. Gateways 2024, October 8-11, 2024, Bozeman, MT.
Jaewoo Shin, Lan Zhao, Carol Song, Dikai Xu, Ming Qu, Ananth Grama, and Dongyan Xu. 2024. Integrating ML/AI workflows in a Streaming Data Management and Processing Platform for Building Energy Research. In Practice and Experience in Advanced Research Computing 2024: Human Powered Computing (PEARC '24). Association for Computing Machinery, New York, NY, USA, Article 54, 1–5. https://doi.org/10.1145/3626203.3670599
I Luk Kim, Lan Zhao, Carol Song, Wei Siong Neo, and Bridgette Kelleher. 2024. Japper: A Comprehensive Framework for Streamlining Jupyter-Based Scientific Web Application Development. In Practice and Experience in Advanced Research Computing 2024: Human Powered Computing (PEARC '24). Association for Computing Machinery, New York, NY, USA, Article 44, 1–4. https://doi.org/10.1145/3626203.3670594
Dikai Xu, Jaewoo Shin, Lan Zhao, Ming Qu. 2024. Optimizing Controls of IoT-based Manufacturing Buildings through Deep Reinforcement Learning. 2024 Herrick Conferences. West Lafayette, IN, USA, July 15-18, 2024.
Adnan Rajib, I Luk Kim, Mehmet B. Ercan, Venkatesh Merwade, Lan Zhao, Carol Song, Kuan-Hung Lin. Cyber-enabled autocalibration of hydrologic models to support Open Science, Environmental Modelling & Software, Volume 158, 2022, 105561, ISSN 1364-8152. https://doi.org/10.1016/j.envsoft.2022.105561
Jaewoo Shin, Lan Zhao, Carol X. Song, Rajesh Kalyanam, Jian Jin, Jacob D. Hosen, Ananth Grama and Dongyan Xu. Enabling Scalable and Reliable Real Time Data Services for Sensors and Devices in StreamCI. Gateways 2022, October 18-20, 2022, San Diego, CA. Available in Zenodo
Carol Song, Preston Smith, Rajesh Kalyanam, Xiao Zhu, Eric Adams, Kevin Colby, Patrick Finnegan, Erik Gough, Elizabett Hillery, Rick Irvine, Amiya Maji and Jason St. John. Anvil - System Architecture and Experiences from Deployment and Early User Operations. Practice & Experience in Advanced Research Computing Conference, July 10-14, 2022, Boston, MA. https://doi.org/10.1145/3491418.3530766
Jungha Woo, Lan Zhao, Carol Song, Iman Haqiqi, Danielle Grogan and Richard Lammers. C3F: A Collaborative Container-based Model Coupling Framework. Practice & Experience in Advanced Research Computing Conference, July 10-14, 2022, Boston, MA. https://dl.acm.org/doi/10.1145/3491418.3530298
S. Gesing, C. Stirm, G. Klimeck, L. Zentner, S. Wang, B. M. V. Martinez, C. D. Eaton, S. Donovan, L. Zhao, C. Song, I. L. Kim, A. Strachan, M. Zentner, R. Kalyanam. Open Science via HUBzero: Exploring Five Science Gateways Supporting and Growing their Open Science Communities. HICSS 2022: Hawaii International Conference on System Sciences. Jan 4-7, 2022. http://hdl.handle.net/10125/79420
V.S.G. Vunnava, J. Shin, L. Zhao, and S. Singh. PIOT-Hub - A collaborative cloud tool for generation of physical input–output tables using mechanistic engineering models. Journal of Industrial Ecology, 07 October 2021, https://doi.org/10.1111/jiec.13204
Thompson, Christopher, Ukkusuri, Satish, Gehlot, Hemant, Lei, Zengxiang, Verma, Rajat, Xue, Jiawei, Qian, Xinwu, Xianyuan, Zhan, Rice, Shawn, & Song, Carol. (2021, October 14). The Development of A-RESCUE Online Task Management. Gateways 2021. https://doi.org/10.5281/zenodo.5569430
Mike Lambert, Rajesh Kalyanam, Rob Kooper, and Baijian Yang. 2021. Securing CHEESEHub: A Cloud-based, Containerized Cybersecurity Education Platform. In Practice and Experience in Advanced Research Computing (PEARC '21). Association for Computing Machinery, New York, NY, USA, Article 43, 1–4. https://doi.org/10.1145/3437359.3465584
Ayman Nassar, Alfonso Torres-Rua, Venkatesh Merwade, Sayan Dey, Lan Zhao, I. Luk Kim, William P. Kustas, Hector Nieto, Lawrence Hipps, Rui Gao, Joseph Alfieri, John Prueger, Maria Mar Alsina, Lynn McKee, Calvin Coopmans, Luis Sanchez, Nick Dokoozlian, Nicolas Bambach Ortiz, Andrew J. Mcelrone, Development of high performance computing tools for estimation of high-resolution surface energy balance products using sUAS information," Proc. SPIE 11747, Autonomous Air and Ground Sensing Systems for Agricultural Optimization and Phenotyping VI, 117470K (12 April 2021); https://doi.org/10.1117/12.2587763
J. Woo, L. Zhao and G. Bowen. Streamlining Geospatial Data Processing for Isotopic Landscape Modeling. Concurrency and Computation: Practice and Experience. 33(2), April 2021. https://doi.org/10.1002/cpe.6324
R. Kalyanam, L. Zhao and C.X. Song. GeoEDF: A Plug-and-play Workflow Framework for Earth Science Research. Demonstration track. Gateways 2020 conference, USA, October 19-21, 2020
J. Shin, L. Zhao, C.X. Song, R. Kalyanam, and J. Jin. SACI - A Cloud Based Real Time Sensor Data Management and Analysis Platform. Demonstration track. Gateways 2020 conference, USA, October 19-21, 2020
I. Kim, L. Zhao, C. X. Song, V. Merwade, A. Rajib. SWATShare: A Collaborative Cyberinfrastructure for Hydrologic Research and Education Using SWAT Model, Demonstration track. Gateways conference, USA, October 19-21, 2020.
J. Woo, L. Zhao and G. Bowen. IsoMAP - A Science Gateway for Isotopic Landscape Modeling. Demonstration track. Gateways 2020 conference, USA, October 19-21, 2020
V.S.G. Vunnava, J. Shin, L. Zhao, and S. Singh. Automating the development of Physical Input-Output Tables and Physical Supply-Use Tables via Engineering Model Simulations PIOT-Hub: An Integrative Simulator and Collaborative Cloud Infrastructure. Journal of Industrial Ecology. Accepted.
Gabriel J. Bowen, Chao Ma, Hannah B. Vander Zanden, Michael B. Wunder, Jason B. West, Lan Zhao, Jungha Woo. Does transpiration matter? Comparing geographic assignment with precipitation- and plant-based isoscapes using assignR. IsoEcol 2020, Austria (submitted)
R. Kalyanam, L. Zhao, C. X. Song, V. Merwade, J. Jin, U. Baldos, J. Smith. GeoEDF: An Extensible GEospatial Data Framework for FAIR Science. In Practice and Experience in Advanced Research Computing (PEARC ’20), July 27–31, 2020. ACM, New York, NY, USA. DOI: 10.1145/3311790.3396631 (ACM access)
M. Bhatt, R. Kalyanam, G. Nishida, L. He, C. May, D. Niyogi, D. Aliaga. Design and Deployment of Photo2Building: A Cloud-based Procedural Modeling Tool as a Service. In Practice and Experience in Advanced Research Computing (PEARC ’20), July 27–31, 2020. ACM, New York, NY, USA.
Lan Zhao, Carol X. Song, Larry Biehl, Venkatesh Merwade, Matthew Huber, Jing Liu, Uris Baldos, and Ilya Shunko. 2020. Building a Gateway Infrastructure for Interactive Cyber Training and Workforce Development. In Practice and Experience in Advanced Research Computing (PEARC ’20), July 27–31, 2020. ACM, New York, NY, USA, 8 pages. https://doi.org/10.1145/3311790.3396639
L. Zhao, C. X. Song, I. Shunko, S. Clark. Suit Up Your Gateway for Interactive Cyber Training. In 12th International Workshop on Science Gateways (IWSG 2020), 11 June 2020.
R. Kalyanam, B. Yang, C. Willis, M. Lambert, C. Kirkpatrick. CHEESE: Cyber Human Ecosystem of Engaged Security Education. In IEEE Frontiers in Education (FIE) 2020.
Cheryl Ann Blain, Antonio Bobet, JoAnn Browning, Billy L. Edge, William Holmes, David R. Johnson, Marti LaChance, Julio Ramirez*, Ian Robertson, Tom Smith, Chris Thompson, Karina Vielma, Dan Zehner and Delong Zuo. The Network Coordination Office of NHERI (Natural Hazards Engineering Research Infrastructure). Frontiers in Built Environment, 28 July 2020. https://doi.org/10.3389/fbuil.2020.00108
S. Matei and R. Kalyanam. Risk-Prone and Risk-Averse Behavior in Natural Emergencies: An Appraisal Theory Approach. Top Faculty Paper Award recipient. The 69th Annual International Communication Association (ICA) Conference, Washington D.C., 24-28 May 2019.
Maheshwari, A., Raz, A. K., Dervisevic, A., Campbell, R., DeLaurentis, D. A., Colligan, W., ... & Kolawole, O. (2018, July). Minimum SysML Representations to Enable Rapid Evaluation using Agent‐Based Simulation. In INCOSE International Symposium (Vol. 28, No. 1, pp. 1706-1719).
Gehlot, Hemant; Zhan, Xianyuan; Qian, Xinwu; Thompson, Christopher; Kulkarni, Milind; Ukkusuri, Satish. (2019). A High Fidelity, Parallel, Agent-based Evacuation Simulator. ASCE Journal of Computing in Civil Engineering; Accepted, 2019 publication pending.
G. Li, J. Zhao, V. Murray, C. Song & L. Zhang (2019) Gap analysis on open data interconnectivity for disaster risk research. Geo-spatial Information Science, 22:1, 45-58, DOI: 10.1080/10095020.2018.1560056
Ackerman, David; Chourasia, Amit; Lofquist, Alec; Ganapathysubramanian, Baskar; Thompson, Christopher; Clark, Steven. (2018). PolyRun - Polymer Microstructure Exploration HPC Gateway. 13th Gateway Computing Environments Conference (Gateways 2018), Austin, TX, September 25-27, 2018. doi.org/10.6084/m9.figshare.7074854.v1
Woo, Jungha; Zhao, Lan; Bowen, Gabriel. (2018). Experiences in Optimizing Geospatial Data Processing for Isotopic Landscape Modeling. 13th Gateway Computing Environments Conference (Gateways 2018), Austin, TX, September 25-27, 2018.
Matei, S., Kalyanam, R., Zhao, L., Song, C. (2018). Social Media Modeling of Human Behavior in Natural Emergencies. 2018 Practice & Experience in Advanced Research Computing Conference (PEARC18), Pittsburgh, PA, July 22-26, 2018.
Biehl, L., Zhao, L., Ellis, C., Kalyanam, R., Campbell, R. and Song, C. (2018). Introducing Research Concepts to Middle School Students via a Geospatial Science Gateway. 2018 Practice & Experience in Advanced Research Computing Conference (PEARC18), Pittsburgh, PA, July 22-26, 2018.
Zhao, L., Kalyanam, R. and Song, C.X. Challenges and experience in enabling science gateway interoperability – A case study on MyGeoHub. 10thInternational Workshop on Science Gateways (IWSG), Edinburgh, Scotland, June 13-15, 2018.
R. Kalyanam, L. Zhao, C. Song, L. Biehl, D. Kearney, I.L. Kim, J. Shin, N. Villoria, V. Merwade, MyGeoHub - A sustainable and evolving geospatial science gateway, Future Generation Computer Systems (2018), doi.org/10.1016/j.future.2018.02.005
R. Campbell, L. Zhao, R. Kalyanam, C.X. Song and L. Biehl. (Oct 2017). Extending Gateways into the Field: Geospatial Extensions and Remote Data Services. 12thGateway Computing Environments (Gateways 2017), Ann Arbor, MI, October 2017.
Kalyanam, R., Campbell, R., Kearney, D., Delgass, L., Biehl, L., Zhao, L., Ellis, C., Song, C. X. Cloud-enabling a Collaborative Research Platform: The GABBs Story. Practice and Experience in Advanced Research Computing (PEARC17), New Orleans, LA, July 9-13, 2017.
Zhao, L., Song, C. X., Kalyanam, R., Biehl, L., Campbell, R., Delgass, L., Kearney, D., Wan, W., Shin, J., Kim, I L., Ellis, C. GABBS - Reusable Geospatial Data Analysis Building Blocks for Science Gateways. 9th International Workshop on Science Gateways (IWSG 2017), Poland, June 19-21, 2017.
Villoria, N.B., Elliott, J., Müller, C., Shin, J., Zhao, L. and Song, C.X. (2017) Web-based download, visualization, and aggregation of future temperature and precipitation during the growing season of major crops. SoftwareX, Nov 2017. (PDF)
Biehl, L.L., Zhao, L., Song, C.X. and Panza, C.G. Cyberinfrastructure for the Collaborative Development of U2U Decision Support Tools. Climate Risk Management, Vol. 15, 2017, pp. 90-108. doi.org/10.1016/j.crm.2016.10.003
Niyogi, D, E.M. Jacobs, X. Liu, A. Kumar, L.L. Biehl, and P.S.C. Rao. Assessment of a long-term high resolution hydroclimatic dataset for the U.S. Midwest. Earth Interactions doi.org/10.1175/EI-D-16-0022.1
T. Hacker, S. Dyke, A. Ozdagli, G. Marshall, C. Thompson, B. Rohler, C. Yuem. (2017). A Research-oriented Automated Data Ingestion Tool for Rapid Data Processing, Visualization and Preservation. Advances in Engineering Software (December 2017), Volume 114 Issue C, Pages 134-143.
Zhao, L., Song, C.X. and Biehl, Larry. MyGeoHub Science Gateway for Spatial Data and a Model for Sustainability. Gateways 2016, San Diego, CA, November 2-3, 2016.
Wan, W., Zhao, L., Shin, J., Zhe, S. and Song, C. X. PyMapLib for Rapid Development of Geospatial Data Analysis Tools. The Third International Conference on CyberGIS and Geospatial Data Science (CyberGIS16), Urbana, IL, July 26–28, 2016.
Kalyanam, R., Campbell, R.A., Wilson, S. P., Meunier, P., Zhao, L., Hillery, B. A. and Song. C.X. Integrating HUBzero and iRODS: Geospatial Data Management for Collaborative Scientific Research, Presentation. The 2016 iRODS User Group Meeting, Chapel Hill, NC, June 7-9, 2016.
Müller, C., J. Elliott, J. Chryssanthacopoulos, A. Arneth, J. Balkovic, P. Ciais, D. Deryng, C. Folberth, M. Glotter, S. Hoek, T. Iizumi, R. C. Izaurralde, C. Jones, N. Khabarov, P. Lawrence, W. Liu, S. Olin, T. A. M. Pugh, D. Ray, A. Reddy, C. Rosenzweig, A. C. Ruane, G. Sakurai, E. Schmid, R. Skalsky, C. X. Song, X. Wang, A. de Wit, and H. Yang. Global Gridded Crop Model evaluation: benchmarking, skills, deficiencies and implications. Geoscientific Model Development, 2016. doi:10.5194/gmd-2016-207
Villoria, NB, Elliott, J, Müller, C, Shin, J, Zhao, L, and Song, C., 2016, January. Rapid aggregation of global gridded crop model outputs to facilitate cross-disciplinary analysis of climate change impacts in agriculture. Environmental Modelling & Software. 75, pp.193-201. doi:10.1016/j.envsoft.2015.10.016
Rajib, M.A., Merwade, V., Kim, I.L., Zhao, L., Song, C. and Zhe, S., 2016, January. SWATShare–A web platform for collaborative research and education through online sharing, simulation and visualization of SWAT models. Environmental Modelling & Software, 75, pp. 498-512. doi:10.1016/j.envsoft.2015.10.032
Thompson, C., Clark, S. and Song, C.X. The XSEDE BLAST Gateway: Leveraging Campus Development for the XSEDE Gateway. Proceedings of the XSEDE16 Conference on Diversity, Big Data, and Science at Scale, Miami, FL, July 17-21, 2016. doi:10.1145/2949550.2949653
Wu, Jingbo (2016) Developing Open Source Geospatial Data Analysis Building Blocks Software. The Journal of Purdue Undergraduate Research: Vol. 6, Article 35. doi:10.5703/1288284316217
Arora, R., Chen, K., Gupta, M., Clark, S., & Song, C. (2015, July). Leveraging DiaGrid hub for interactively generating and running parallel programs. In Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberinfrastructure (no. 44). ACM. doi:10.1145/2792745.2792789
Thompson, C., L. Zhao, S. Clark, P.E. Barbone, A. Oberai, C. Song, T. Seidl, C. Liu. Bring the NLACE Model Online Using XSEDE and HUBzero. In Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberinfrastructure (no. 36). ACM. doi:10.1145/2792745.2792781
Prokopy, L.S., C.E. Hart, R. Massey, M. Widhalm, J. Andresen, J. Angel, T. Blewett, O.C. Doering, R. Elmore, B.M. Gramig, P. Guinan, B.L. Hall, A. Jain, C.L. Knutson, M.C. Lemos, L.W. Morton, D. Niyogi, R. Power, M.D. Shulski, C. X. Song, E.S. Takle, and D. Todey. Using a team survey to improve team communication for enhanced delivery of agro-climate decision support tools. Agricultural Systems,Vol. 138, pp. 31-37, September 2015. doi:10.1016/j.agsy.2015.05.002
McLennan, M., Clark, S., Deelman, E., Rynge, M., Vahi, K., McKenna, F., Kearney, D. and Song, C., 2015. HUBzero and Pegasus: integrating scientific workflows into science gateways. Concurrency and Computation: Practice and Experience, 27(2), pp.328-343. doi:10.1002/cpe.3257
Fry, Donald N., Robert Campbell, and Daniel A. DeLaurentis. Modeling Systems-of-Systems from Multiple Design Perspectives: Agents, Interfaces, and Architectures. AIAA Modeling and Simulation Technologies Conference. 2015.
G. J. Bowen, A. Putman, H. B. Vander Zanden, S. P. Good, Z. Liu, S. Terzer, L. Zhao, J. B. West, J. Revenaugh, B. H. Wilkinson. (2015). Leveraging GNIP and Investigator Research to Map Isotopic Climate: Two Decades of Precipitation Isoscapes. 2015 Isotope Hydrology Symposium, Vienna, May 2015.
Gabriel J. Bowen, Zhongfang Liu, Hannah B. Vander Zanden, Lan Zhao, George Takahashi. (2014). Geographic assignment with stable isotopes in IsoMAP. Methods in Ecology and Evolution 03/2014
M. A. Rajib, V. Merwade, I. L. Kim, S. Zhe, L. Zhao, C. Song. Spatio-temporal visualization for SWAT outputs using SWATShare, 2014 SWAT conference, Brazil, July 2014
M. Ramadas, I. Chaubey, D. Niyogi, C. X. Song and R. S. Govindaraju. Probabilistic Assessment of Agricultural Droughts using Graphical Models. The 69th Soil Water Conservation Society (SWCS) International Annual Conference on July 27-30, 2014 in Lombard, IL.
Other Papers
Lan Zhao, Jaewoo Shin, I Luk Kim, Carol Song, Jibin Joseph, Venkatesh Marwade and Shawn Rice. CyberFaces: a scalable and flexible online platform for interactive cyber learning and workforce development. BYOP, Gateways 2024, Bozeman Montana, USA, October 8-10, 2024
Kalyanam, R., Song, C. and Zhao, L. Catalyzing the Geospatial Software Community of the Future (Position paper). Conceptualizing a Geospatial Software Institute (GSI) Workshop 3: Strategic Plan and Governance of GSI, Annapolis, MD, January 27-29, 2019.
Song, C., Kalyanam, R. and Zhao, L. Challenges in discovering, accessing, processing and utilizing large remote spatial data. Position paper, Conceptualizing a Geospatial Software Institute (GSI) Workshop 2: Geospatial Use Cases and Core Technical Capabilities, Chicago, IL, July 15-17, 2018
CIF21 DIBBs: Integrating Geospatial Capabilities into HUBzero, PI Carol Song, NSF award #1261727. White paper at NSF DIBBs PI workshop, Washington D.C., July 2018
Song, C., Kalyanam, R. and Zhao, L. Envisioning an Open, Collaborative and Seamless Geospatial Software Ecosystem. Position paper, GSI community workshop on Geospatial Software: Connecting Big Data with Geospatial Discovery and Innovation, Los Angeles, CA, January 28-30, 2018
Song, C., Smith, P. and Younts, A. Creating a seamless campus cyberinfrastructure to support data-driven domain sciences. Position paper. Research Data Management Implementation workshop, Arlington, VA, September 14-15, 2017
Kalyanam, R., Zhao, L and Song, C. GABBs: Geospatial Data Building Blocks (2017). Position paper at The First NSF Data Infrastructure Building Blocks Workshop, Arlington, VA, January 11-12, 2017.
Tutorials & Education Events
| Iman Haqiqi, Rajesh Kalyanam, Lan Zhao and Nick Manning, |
Gridded Economic Responses to Climate and Environmental Changes: Telecoupling Land, Water, and Labor Through Agricultural Markets, I-GUIDE forum 2024, October 14-16, 2024, Jackson, Wyoming, USA.
Yang, B., Kalyanam, R., Willis, C., Lambert, M., Kirkpatrick, C. CHEESE: Cyber Human Ecosystem of Engaged Security Education. Workshop, ACM SIGITE '19.
Huber, M., Merwade, V., Song, C., Zhao, L. and Kim, I.L. Graduate level course FAIR Data Practice, EAPS 59100 Purdue, Fall semester 2019 (course using mygeohub.org and supported by SSG staff, including giving guest lectures)
J. Liu, U. Baldos and T. Hertel. Short course on Multi-scale Analysis of Sustainability, West Lafayette, IN, September 25, 2019 (course using mygeohub.org and supported by SSG staff)
Uris Baldos. Workshop on Long-run analysis of SDGs linked to the food-environment-energy using open-source economic modeling. Sustainability and Development Conference, U. of Michigan, October 11, 2019 (course using mygeohub.org and supported by SSG staff)
Lu, E, Short Course in Geospatial Data Extraction and Visualization, online tutorial. Summer 2019. Accessible: https://mygeohub.org/courses/geo_viewing.
Workshop on Open-Source Analysis of SDGs at the Food-Water-Energy Nexus Using Global, Gridded Modeling on June 7, 2019 at Tecnológico de Monterrey, Mexico (supported by SSG staff and mygeohub)
Jungha Woo, Lan Zhao. Workshop on Open-Source Analysis of SDGs at the Food-Water-Energy Nexus Using Global, Gridded Modeling, 2018 Sustainability & Development Conference, Ann Arbor, MI, November 9, 2018 (hands-on training of SIMPLE-G and SIMPLE-G-US on MyGeoHub)
Kalyanam, R. 2018 SGCI Hackathon, Pittsburgh, PA, July 26-27, 2018 (designed and ran the hackathon geospatial data project using MyGeoHub)
Song, C. X., Zentner, M., Hillery, E., Kalyanam, R., Kearney, D., Zhao, L., Ellis, C. Interactive Science and Geospatial Visualization Tools for HUBzero Science Gateways. Tutorial. Practice and Experience in Advanced Research Computing (PEARC17), New Orleans, LA, July 9-13, 2017.
L. Biehl, R. Kalyanam, C. Ellis. TOTAL Camp, West Lafayette, IN, June 2017
Benham, D., Clark, S., Song, C.X., Betsy, H., Smith, P. and Ellis, C. Building a Campus Cyberinfrastructure Hub on the Cloud with HUBzero, Tutorial. The 2016 Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, July 17-21, 2016.
Biehl, L.L., Zhao, L., Perez, A.T.C., Ellis, C. and Song, C.X. Geospatial data around you. Presentation and tutorial. Turned Onto Technology And Leadership – the TOTAL Camp, West Lafayette, IN, June 2016.
Peer-reviewed and invited Presentations, invited panel/workshop participation, other presentations
Rajesh Kalyanam, Jungha Woo, Lan Zhao, Carol X. Song and Jack Smith. GeoEDF: A Framework for Designing and Executing Reproducible Geospatial Research Workflows in Science Gateways. 14th International Workshop on Science Gateways. June 15-17, 2022, Trento, Italy. Abstract & presentation
Rajesh Kalyanam and Carol Song. GeoEDF: A Workflow Framework for Composing and Executing Geospatial Research Workflows. UCAR Software Engineering Assembly’s 2022 Improving Scientific Software conference, April 4-8, 2022. Abstract & presentation
Nicole Brewer, Rajesh Kalyanam, Rob Campbell, Carol X. Song and Lan Zhao. Scientific Web Application Template. Presentation at the Mini Gateways 2022, April 5-7, 2022. Abstract & presentation
Song, C., Kalyanam, R., Zhao, L. and Campbell, R. Evolving and Sustaining Collaborative Cyberinfrastructure to Support FAIR Science. invited talk. Minisymposium: Enhancing Sustainability and Productivity for Research Software, 2021 SIAM Conference on Computational Science and Engineering, Dallas, TX, March 2021 (slides, poster)
Kalyanam, R., GeoEDF: An Extensible Geospatial Data Framework Towards FAIR Science, Purdue GIS Day, West Lafayette, IN, November 7, 2019
Song, C. MyGeoHub for Geospatial Data-Driven Science and Training. Purdue booth. Supercomputing, Denver, CO, November 17-22, 2019
Song, C., Kalyanam, R., and Zhao, L. Advancing A Geospatial Science Gateway with An Extensible Data Framework for FAIR Science. CODATA 2019 Towards next-generation data-driven science: policies, practices and platforms, Beijing, China, 19-20 September 2019.
Champions Fellows Presentation at the PEARC19 Conference: Chet Langin, Southern Illinois University, presented on his Fellows project with PI Uris Baldos and Mentor Lan Zhao. (July/August 2019)
Merwade, V., A. Rajib, I Luk Kim, J. Shin, J. Smith, L. Zhao, C. Song, HydroGlobe - a platform enabling the integration of earth observations in hydrologic models, presentation at CUAHSI Conference on Hydroinformatics, Provo, UT, 29-31 July, 2019.
Song, C. What should the GSI do? Panelist presentation at the Geospatial Software Institute Conceptualization Workshop “Strategic Plan and Governance of GSI”, Annapolis, MD, July 14-16, 2019.
Merwade, V., A. Rajib, S. Saksena, I Luk Kim, L. Zhao and C. Song. Hyper-resolution flood modeling and mapping for the Ohio River Basin, Ohio River Basin Flood Risk Management Workshop, Erlanger, KY, April 11, 2019.
Song, C. Everything you ever wanted to know about MyGeoHub! (Invited). HUBzero annual MatchBox meeting, West Lafayette, IN, December 13, 2018
M. Zentner and C.X. Song. Solving Science Gateway Sustainability as a Community: MyGeoHub.org and OneSciencePlace.org (Invited talk). AGU Fall Meeting, Washington D.C., December 10-14, 2018
Kalyanam, R., Song, C. ESIP Data Help Desk, AGU Fall Meeting, December 10, 2018.
Song, C. Science Gateway MyGeoHub, presentation at Purdue booth, Supercomputing conference, November 2018.
Song, C. Sustaining a geospatial science gateway to support FAIR science practices and training. GSA Annual Meeting, Indianapolis, IN, November 4, 2018.
Song, C. & Smith, J. Geospatial data building blocks and MyGeoHub, presentation to the XSEDE Campus Champions Tech Talk webinar, October 31, 2018.
Song, C. What is the GeoHub? Presentation at the 2018 Conference on Long Run Sustainability of US Agriculture, National Press Club, Washington D.C., September 17, 2018.
Song, C. Array of Things User Workshop, Argonne National Lab, Chicago, IL, August 28-30.
Zhao, L., Kim, I.L., Shin, J., Merwade, V., and Song, C.X. (2018). Showcasing a Collaborative Hydrological Modeling Platform. 2018 Practice & Experience in Advanced Research Computing Conference (PEARC18), Pittsburgh, PA, July 22-26, 2018.
Song, C. Rethinking NSF's Computational Ecosystem for 21st Century Science and Engineering Workshop, Alexandria, VA, May 30-31, 2018
Song, C. First Software Sustainability Institute Workshop of URSSI (US Research Software Sustainability Institute), Berkeley, CA, April 12-15, 2018.
Song, C. Panelist at GSI workshop: Geospatial Software: Connecting Big Data with Geospatial Discovery and Innovation, Los Angeles, CA, January 28-30, 2018
Larry Biehl, et al. MultiSpec: A Desktop and Online Geospatial Image Data Processing Tool, oral presentation, AGU Fall Meeting, New Orleans, LA, Dec 2017 (slides available at: https://mygeohub.org/resources/1385)
Song, C.X. Geospatial Data Building Blocks and MyGeoHub Science Gateway. Presentation at Purdue booth. Supercomputing conference, Denver, CO, November 2017.
Rajesh Kalyanam, Lan Zhao, Rob Campbell, Derrick Kearney, I Luk Kim, Jaewoo Shin, Larry Biehl, Wei Wan and Carol Song. (2017). Demo: MyGeoHub Geospatial Gateway. Gateway Computing Environments (Gateways 2017), Ann Arbor, MI, October 2017
Song, C.X. An open-source geospatial cyberinfrastructure for interdisciplinary collaboration and broader engagement. Impacts World 2017, Potsdam, Germany, October 11-13, 2017.
Song, C.X. Building, Evolving, and Sustaining A Geospatial Science Gateway. Invited presentation at the Earth Science Information Partnership (ESIP) Summer Meeting, Bloomington, IN, July 24-26, 2017.
Adnan Rajib, I Luk Kim, Mehmet Ercan, Venkatesh Merwade, Lan Zhao and Carol Song. Enabling high performance online calibration of SWAT models in SWATShare, 2017 CUAHSI Conference on Hydroinformatics, July 25 – 27, 2017, Tuscaloosa, Alabama.
Adnan Rajib, Venkatesh Merwade, Lan Zhao, Jaewoo Shin, Jack Smith and Carol Son. HydroGlobe – A cyber-enabled platform for auto-extraction and processing of earth observations for hydrologic analysis, 2017 CUAHSI Conference on Hydroinformatics, July 25 – 27, 2017, Tuscaloosa, Alabama
Song, C.X. and Zhao, L. Geospatial Data Hub to Support Big Ideas! Presentation at the USDA/AFRI project workshop "Assessing the Long Run Sustainability of US Agriculture in an Integrated Global Economy", West Lafayette, IN, May 11-12, 2017.
Song, C.X. GABBs: Geospatial Data Building Blocks (2017). The first NSF Data Infrastructure Building Blocks Workshop (the panel of significant results), Arlington, VA, January 11-12, 2017.
Carol Song. GABBs: Cyberinfrastructure for Self-Service Geospatial Data Exploration, Computation and Sharing, invited presentation at the South Big Data Hub-Data Sharing and Infrastructure Working Group meeting, November 11, 2016.
Song, C.X. Gap Analysis on Open Data Interconnectivity for Global Disaster Risk Research. Presentation. SciDataCon 2016, September 11-13, 2016.
Shawn Strande, Rick Wagner, Ken Hackworth, Ed Hanna, Steve Gallo, Dave Hart, Victor Hazlewood, Amy Schuele and Carol Song. Coin of the Realm: Current practices and future opportunities in processing of XSEDE allocations awards and usage data. Birds-of-a-feather. The 2016 Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, July 17-21, 2016.
Song, C.X. Geospatial-enabled Data Exploration and Computation through Data Infrastructure Building Blocks. Presentation. The Workshop on Best Practices in Data Infrastructure, Pittsburgh, PA, May 17-18, 2016.
Song, C.X. Science Software as a Service. Presentation at West Virginia University, May 16, 2016.
Song, C.X. and Zhao, L. Cyberinfrastructure Support for the AFRI Project. AFRI Project Workshop, West Lafayette, IN, April 15, 2016.
Song, C.X. Geospatial-enabled Data Exploration and Computation through Data Infrastructure Building Blocks, The 5th National Data Service Workshop, Chapel Hill, NC, April 4-6, 2016.
Song, C.X. GABBS for FEW Community, 2016 Midwest Big Data Hub all-hands meeting, Chicago, IL, March 21-22, 2016.
Song, C.X., L. Biehl, V. Merwade, N. Villoria. Geospatial-enabled Data Exploration and Computation through Data Infrastructure Building Blocks. The American Geographical Union 2015 Fall Meeting, IN51C: Exploiting Big Earth Data: Computation, Testing, and CyberGIS II, San Francisco, CA, December 18, 2015 (invited oral presentation)
Biehl, L. GeoSpatial Tools/Data provided by ITaP Research Computing, Purdue College GIS Day, West Lafayette, IN, November 12, 2015.
Song, C.X., L. Biehl, W. Wan. Broadening Access to Geospatial Data Analysis and Visualization, 9th Symposium of the International Society for Digital Earth (ISDE), Halifax, Nova Scotia, Canada, October 5, 2015.
Song, C. X. The GABBs Report – Building Geospatial Capability in HUBzero, invited presentation at The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
Biehl, L. Remote Sensing Analysis in HUBzero, The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
Kalyanam, R. Data driven Collaboration Environments: Integrating HubZero and iRODS, The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
Ko, H. J. Upload, Configure, Analyze, and Share Geospatial Data in 3 Minutes, The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
Zhao, L. Delivering Climate Data to a Broad User Community, The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
Thompson, C. Using the HUBzero Platform to Enable Remote Computing on DiaGrid, The HUBzero annual conference Hubbub 2015, Indianapolis, IN, September 14 15, 2015
M. A. Rajib, V. Merwade, I. Kim, L. Zhao and C. Song, SWATSHARE- A model instance program client for HydroShare for sharing, simulation and visualization of SWAT Models, 3rd CUAHSI Conference of Hydroinformatics, Tuscaloosa, AL July 15-17, 2015.
Saurabh Bagchi, Carol Song, Ravi Iyer, Zbigniew Kalbarczyk, and Nathan Debardeleben. FRESCO: An Open Data Repository for Dependability Research and Practice, Supercomputing conference, Birds-of-a-feather, November 18, 2015.
Song, C.X. and Merwade, V. Geospatial Data Infrastructure Building Blocks (GABBs) for Research and Education, 3rd CUAHSI Conference on Hydroinformatics, Tuscaloosa, AL, July 15 17, 2015
Biehl, L. Presentation at the GLOBE workshop, West Lafyette, IN, July 8, 2015
Song, C.X. Sharing Geospatial Data and Tools Online, invited presentation at the 2015 Unidata User Meeting, Boulder, CO, June 22 25, 2015
Posters
I Luk Kim, Lan Zhao, Carol X. Song, Wei Siong and Bridgette Kelleher. Japper: A Comprehensive Framework for Streamlining Jupyter-Based Scientific Web Application Development. Gateways 2024, Bozeman Montana, USA, October 8-10, 2024.
Carol Song, Rajesh Kalyanam, Lan Zhao, Uris Baldos, Jian Jin, Venkatesh Merwade, Jack Smith, Rob Campbell, Jaewoo Shin, Jungha Woo. CSSI Framework: GeoEDF: An extensible geospatial data framework toward FAIR science. NSF CSSI PI meeting, Charlotte, NC, August 12-13, 2024.
Venkatesh Merwade, Carol Song, Jacob Hosen, Wanju Huang, Adnan Rajib, Lan Zhao, Shawn Rice, I Luk Kim, Jaewoo Shin, Jibin Joseph, and Seoljoo Kang. CyberTraining for Open Climate, Water and Environmental Sustainability. NSF CyberTraining PI meeting, Charlotte, NC, August 12-13, 2024.
I Luk Kim, Krutikkumar Thakorbhai Patel, Adnan Rajib, Lan Zhao, Venkatesh Merwade and Carol Song, Dynamic and interactive online flood inundation mapping using the SWAT-FLOOD framework, IGUIDE Forum 2024, October 14-16, 2024, Jackson, Wyoming, USA.
V. Merwade, C. X. Song, J. Hosen, W. J. Huang, A. Rajib, L. Zhao, S. Rice and J. Joseph, CyberTraining for Open Climate, Water and Environmental Sustainability, AGU Fall Meeting 2023, December 11-15, 2023, San Francisco, CA.
J. Shin, L. Zhao, C. Song, R. Kalyanam. Streaming Data Cyberinfrastructure for Global-Local-Global Analysis. AGU Fall Meeting 2022, December 12-16, 2022, Chicago, IL.
J. Woo, L. Zhao, C. Song, D. Grogan, I. Haqiqi, R. Lammer. Accelerating Multi-scale Cross-domain Model Linking Using Advanced Cyberinfrastructure. AGU Fall Meeting 2022, December 12-16, 2022, Chicago, IL.
V. Merwade, M. Huber, C. Song, L. Zhao, S. Dey, J. Joseph. CyberTraining for Findable, Accessible, Interoperable, and Reusable (FAIR) Science in Water and Climate. AGU Fall Meeting 2022, December 12-16, 2022, Chicago, IL.
V. Merwade, M. Huber, C. Song, L. Zhao, S. Dey, J. Joseph, Q. Kong. CyberTraining Modules for Findable, Accessible, Interoperable, and Reusable (FAIR) Science in Water and Climate. AGU Fall Meeting 2021, December 13-17, 2021, New Orleans, LA.
J. Shin, L. Zhao, C. X. Song, R. Kalyanam, J. Jin, J. D. Hosenn, A. Grama, D. Xu. SACI - Sensor Data Anaysis Cyber Infrastructure, Managinng and Analyzinng Real-Time Sensor Data in the Cloud. 2021 C4E Environmental Reserach Expo, West Lafayette, IN, October 7, 2021.
V. Merwade, M. Huber, C. Song, L. Zhao, S. Dey and J. Joseph. CyberTraining Modules for Findable, Accessible, Interoperable, and Reusable (FAIR) Science in Water and Climate. 2020 AGU fall meeting. December 2020.
R. Kalyanam, L. Zhao, C. X. Song, V. Merwade, U. Baldos, J. Jin, J. Smith. GeoEDF: An Extensible Geospatial Data Framework for FAIR Science. Online iPoster at the EarthCube 2020 Annual Meeting (virtual).
C. Song & R. Kalyanam. CSSI Framework: Extensible Geospatial Data Framework towards FAIR Science. Presentation and poster at the NSF CSSI PI Workshop, Seattle WA, February 12-14, 2020. (talk slides, poster)
R. Kalyanam, L. Zhao, J. Jin, L L. Biehl, U. Baldos, R. Campbell, C. Ellis, J. Smith, N. Brewer, V. Merwade, J. Woo and C. X Song. GeoEDF – An Extensible Geospatial Data Framework for FAIR Science. AGU Fall Meeting, San Francisco, CA, December 9-13, 2019
V. Merwade, C.X Song, M. Huber, and W. Huang. CyberTraining for Findable, Accessible, Interoperable, and Reusable (FAIR) science in Water and Climate. AGU Fall Meeting, San Francisco, CA, December 9-13, 2019
V. Merwade, A. Rajib, L. Zhao, J. Shin, I. L. Kim, and C. X Song. HydroGlobe - a platform enabling the integration of earth observations in hydrologic models. poster. AGU Fall Meeting, San Francisco, CA, December 9-13, 2019
R. Kalyanam, L. Zhao and X. C. Song. GeoEDF: An Extensible Geospatial Data Framework for FAIR Science. Gateways 2019 conference, San Diego, CA, September 23-25, 2019.
L. Zhao, X. C. Song, R. Kalyanam, V. Merwade, M. Huber, L. Biehl, C. Thompson, R. Campbell and C. Ellis. Leveraging MyGeoHub Gateway for Cyber Training and Workforce Development. Gateways 2019 conference, San Diego, CA, September 23-25, 2019.
Amrish Nayak, Simplifying access and use of large remote geospatial datasets. Purdue Discovery Park Undergraduate Research Symposium, July 25, 2019 (summer research internship)
Edwin Lu, Simplifying geospatial visualization and analysis. Purdue Discovery Park Undergraduate Research Symposium, July 25, 2019 (summer research internship)
Adnan Rajib, Venkatesh Merwade, Lan Zhao, Jaewoo Shin, I Luk Kim, Carol Song, Heather E. Golden, Charles R. Lane, Bridging the gap between remotely sensed big data and watershed hydrologic models, AGU Fall Meeting, Washington DC, Dec 2018
Shin, J., Zhao, L., Song, C.X., Jin, J., Song, Z., Wang, L. (2018). A Flexible, Cloud-based Sensor Data Service Platform. Student poster. 2018 Practice & Experience in Advanced Research Computing Conference (PEARC18), Pittsburgh, PA, July 22-26, 2018.
Rajesh Kalyanam. MyGeoHub: A collaborative geospatial research and education platform, poster, AGU Fall Meeting, New Orleans, LA, Dec 2017
Lan Zhao, Adnan Rajib, Venkatesh Merwade, Jaewoo Shin, Jack Smith and Carol X Song. A New Cyber-enabled Platform for Scale-independent Interoperability of Earth Observations with Hydrologic Models, poster, AGU Fall Meeting, New Orleans, LA, Dec 2017.
Hsu, W., Biehl, L., Maud, A.R. and Yeh, T. Developing an Online Geospatial Data Processing Tool Using the HUBzero Platform. Poster. Practice and Experience in Advanced Research Computing (PEARC17), New Orleans, LA, July 9-13, 2017.
Woo, J., Integrating XSEDE OAuth 2.0 with the DiaGrid Science Gateway. Poster. Practice and Experience in Advanced Research Computing (PEARC17), New Orleans, LA, July 9-13, 2017.
Zhao, L., Song, C.X. and Biehl, L. GABBs: Cyberinfrastructure for Self-Service Geospatial Data Exploration, Computation, and Sharing. Poster presentation at the American Geophysics Union (AGU) Fall Meeting 2016, San Francisco, CA, December 12-16, 2016.
Zhao, L., Kim, I.L., Song, C.X., Merwade, V., Rajib, A., Morsy, M., Goodall, J., Miles, B., Stealey, M., Dash, P. and Tarboton, D. Bridging Hydroinformatics Services Between HydroShare and SWATShare. Poster presentation at the American Geophysics Union (AGU) Fall Meeting, San Francisco, CA, December 12-16, 2016.
Christopher Thompson, Robert Campbell, & Steven Clark. DiaGrid: Science Gateways as a Service. 2016 Gateways conference, San Diego, CA, November 2-3, 2016.
Lan Zhao and GABBS team. Developing Geospatial Data Analysis Building Blocks (GABBS). 2016 Gateways conference, San Diego, CA, November 2-3, 2016.
Lan Zhao, Carol Song and Larry Biehl. MyGeoHUB.org - An Open Platform for Geospatial Tool Development and Sharing. 2016 Gateways conference, San Diego, CA, November 2-3, 2016.
Purdue GIS Day, West Lafayette, IN, November 4, 2016 (available in ePub)
Lan Zhao, I Luk Kim, Venkatesh Merwade, Adnan Rajib and Carol Song. Enabling Hydrological Modeling Education Using an XSEDE Science Gateway. Poster at The 2016 Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, July 17-21, 2016.
Jungha Woo, Shava Smallen and John-Paul Navarro. Improving Karnak prediction service. Poster at The 2016 Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, July 17-21, 2016.
Zhao, L. and Song, C.X. Connecting XSEDE Resources to Geospatial Data Analysis Workflows using GABBS Building Blocks. Poster at The 2016 Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, July 17-21, 2016.
Adnan Rajib, I Luk Kim, Venkatesh Merwade, Lan Zhao and Carol Song, SWATFlow: A Platform for Providing High Resolution River Flow Information for Enhanced Water Resources Management, Education and Research, October 2015, Purdue ESE Symposium, won the Audience Choice Award.
Papers citing MyGeoHub:
Bhar, Anupam & Feddersen, Benjamin & Malone, R.W. & Kumar, Ratnesh. (2021). Agriculture Model Comparison Framework and MyGeoHub Hosting: Case of Soil Nitrogen. Inventions. 6. 25. 10.3390/inventions6020025.